| 563 | 2 | 1 | San Elijo Elementary | San Marcos Unified | 858 | 72.9% | 71.84% | 73.99% | 7.3 |
| 687 | 3 | 2 | Double Peak | San Marcos Unified | 1,211 | 70.1% | 71.56% | 68.72% | 7.0 |
| 961 | 4 | 3 | Richland Elementary | San Marcos Unified | 823 | 65.4% | 68.11% | 62.63% | 6.5 |
| 1036 | 6 | 4 | Paloma Elementary | San Marcos Unified | 715 | 63.6% | 63.74% | 63.37% | 6.4 |
| 1400 | 7 | 5 | Knob Hill Elementary | San Marcos Unified | 752 | 57.2% | 62.05% | 52.35% | 5.7 |
| 1596 | 1 | 6 | Baypoint Preparatory Academy - San Diego Charter | Baypoint Preparatory Academy - San Diego District | 199 | 54.0% | 61.06% | 46.9% | 5.4 |
| 1600 | 8 | 7 | Twin Oaks Elementary | San Marcos Unified | 675 | 53.9% | 53.8% | 54.04% | 5.4 |
| 2177 | 10 | 8 | Discovery Elementary | San Marcos Unified | 668 | 46.0% | 51.5% | 40.6% | 4.6 |
| 3408 | 1 | 9 | High Tech Elementary North County Charter | High Tech Elementary North County District | 442 | 33.2% | 40.0% | 26.36% | 3.3 |
| 4212 | 11 | 10 | La Mirada Academy | San Marcos Unified | 936 | 26.3% | 32.65% | 19.91% | 2.6 |
| 4609 | 12 | 11 | San Marcos Elementary | San Marcos Unified | 624 | 23.2% | 24.17% | 22.22% | 2.3 |